Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834340.1_cds_XP_016505568.1_18894
CDS Infomation

[gene=LOC107823441] [db_xref=GeneID:107823441] [protein=heparan-alpha-glucosaminide N-acetyltransferase-like] [protein_id=XP_016505568.1] [location=join(242..439,1056..1193,1274..1355,2594..2670,2834..2940,3678..3810,4018..4134,4240..4331,4684..4750,4853..4931,5026..5117,6667..6810,7481..7621)] [gbkey=CDS]
Sequence

ATGTCCTCGCCGCCGCTGACGGTGGTCACAGATTCCGGCGAACGAGCTCCGCTTCTTCTT
TCCAATTCTTCGCCTGAATTAATATTGTCGCACTCGCACGCTACAGATGGAGAAATAGTC
TCCGAGCCGGCCGGATCAAAACCTACTCCCAAACAACGTTTGCTCTCTCTCGATGTCTTT
AGAGGCCTTACCGTCGCTTTGATGATTTTGGTTGATGATGCTGGAAAGGCTTTCCCATCA
ATAAACCACTCCCCGTGGTTTGGAGTGACCCTTGCCGACTTTGTGATGCCCTTTTTCCTC
TTTATTGTTGGGGTCTCTGCGAGTCTAGTATTCAAGAAAGTTTCCAGCAAACCACAAGCT
ACAAAGAAAGTCTTACTGAGGACAGTTAAGCTCTTTATTTTGGGAGTGTTCCTTCAAGGT
GGGTATTTCCATGGGCGCGACAACCTGAGTTATGGAGTTGATATTGCTAGAATTAGATGG
ATGGGAGTGTTACAGAGGATTTCTATTGGTTATCTATTTGCTTCAATTCTGGAAATTTGG
CTTGCCAATGATTATCCTGTTGATTCAGCAAAGGCATTCGTCAGGAGATACTTCTTTCAA
GCGGTGGCTGGAACCTTAATTGGTCTATCTTACCTGATTTTGCTGTATGGACTCTATGTT
CCGGATTGGTTCTTTGAAATATCGAGTCTTGACATGGAATCAGCGGTTTCAGGATATGAA
TTGAGTACTCAAACTGTTAACTGTGGAGTGAGGGGCAGTCTTGATCCTCCTTGCAATGTG
GTTGGTCTGATTGATAGGCTTCTTCTTGGTGAAAAACACCTTTATCAACGTCCTGTCTAC
AGAAGAACCAAGGAATGCAGCGTCAACTCTCCTGATTATGGACCTCTACCATCAAATGCA
CCTGGATGGTGCCTTGCTCCATTTGACCCTGAAGGAATCTTAAGTTCTTTGATGGCCGCC
ATTACATGCCTTGTGGGCTTGCATTTCGGCCACATTCTTGTGCATGTTAAAGGTCACATG
CAGAGGGTAATCTTTTGGTCCGTATTTTCTGTCTTTCTAACAATTGTAGGATATGTGTTG
GAGCTTGCAGGTGTTCCTTTTTCTAAACCGCTTTACACATTGAGCTATATGTTCATCACG
GCTGGAGTATCCGGTTTGCTCTTAGTAGTTCTTTATTACCTTGTTGATGTCAAATGTTTC
AGGAAGCCATTTATACTATTTCAGTGGATGGGAATGAATGCTCTCATCCTCTATGCTTTG
GCTGCTTGTGACCTCTTTCCCGCAGCACTACAAGGTTTCTATTGGTATTCACCTGAAAAC
AACTTGGTTGACATCACAGAAAGGTTCCTTCAAGCAGTATTTCATTCAAAGAAGTGGGGT
ACTCTGGTATTTGTGATGCTTGAGATACTGTTTTGGGGCTTGGTTGCTGGATTCCTTCAC
GCAAAAAAGGTTTATGTAAAGCTATGA

Peptide Sequence

PEP ID

XP_016505568.1
PEP Infomation

PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Nicotiana tabacum]
Sequence

MSSPPLTVVTDSGERAPLLLSNSSPELILSHSHATDGEIVSEPAGSKPTPKQRLLSLDVF
RGLTVALMILVDDAGKAFPSINHSPWFGVTLADFVMPFFLFIVGVSASLVFKKVSSKPQA
TKKVLLRTVKLFILGVFLQGGYFHGRDNLSYGVDIARIRWMGVLQRISIGYLFASILEIW
LANDYPVDSAKAFVRRYFFQAVAGTLIGLSYLILLYGLYVPDWFFEISSLDMESAVSGYE
LSTQTVNCGVRGSLDPPCNVVGLIDRLLLGEKHLYQRPVYRRTKECSVNSPDYGPLPSNA
PGWCLAPFDPEGILSSLMAAITCLVGLHFGHILVHVKGHMQRVIFWSVFSVFLTIVGYVL
ELAGVPFSKPLYTLSYMFITAGVSGLLLVVLYYLVDVKCFRKPFILFQWMGMNALILYAL
AACDLFPAALQGFYWYSPENNLVDITERFLQAVFHSKKWGTLVFVMLEILFWGLVAGFLH
AKKVYVKL

Transcript Sequence

Gene sequence data has not been registered.